species:   Rhirr
pid:       PID1181
parent:    Locus_818
paralog:   
locus:     scaffold_81:287993-288405
matures:   ['UGAGAGAUCUUUACUUGCAG', 'GCAAGUAAGAGAUCUCUCAAU']
srr:       ERR2841785
genome:    /Users/jax/+Genomes/Fungal_genomes/Rhirr.Rhiir2_1_AssemblyScaffolds.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Silvestri2019-js.ERR2841785.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Silvestri2019-js.ERR2841785.cram scaffold_81:287993-288405

0 out of bounds
3267 alignments
3192 proper strand
3144 stranded perfect matches

                                                                                                                                 *******************                ********************                                                                                                                                                                                                                                     
GGAACGAAAACGUAAUGCGGACGAAACCGUAUUUGACGCCAAUUGGUAAAAUUCAUUAUUUAUUAUAAUCUUUUUUUUUUUUGCAACGUUAAUUUUAAUGUUUGACCAUCUUUAUUCUUCCACAAACGUAUUGAGAGAUCUUUACUUGCAGAAAAAUUCUUCGGCAAGUAAGAGAUCUCUCAAUACGUUUGUGGAAUCUCAUCAAGACCAUGCAUCACAGCGAGUAAAGAUCUCAGUACGUCUGUGGAAUCUCGAGACCAUGCAGACUGUCGCCAUCUUUACCGGAGAAUUGAUUAUAAGGAAUAUAAUAAAAAAAAUAAUAUCAAUAAAUAUUCACCACCCAAAUUUUGUUACAAAUAUCUUAAAGAAAUUGGGGAAAUAGUCAUAAUAUUUAGUCAUAGUAAUAUUUAGUU
...(((....)))(((((((......)))))))(((((((....))).........(((((.((((((((..((((((......(((((((....)))))))(((..((((((((((((((((((((((((((((((((((((((((((.(((......))).)))))).))))))))))))))))))))))))))...............((......)))))))))))).)))(((((((((((...((....))...))))))).)).))..........))))))..)))))))).))))).............(((((......))))).....(((((.((((................)))).))))).(((((.......))))).))))...............
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAUCUUUACUUGCAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=20 a=516 c
-------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAGUAAGAGAUCUCUCAAU------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=21 a=12 c*
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAUCUUUACUUG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=17 a=631 ma
----------------------------------------------------------------------------------------------------------------------------------------------------------------------AGUAAGAGAUCUCUCAAU------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=18 a=0 ma*

--AACGAAAACGUAAUGCGGACGAAACCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ l=27 a=1 
----CGAAAACGUAAUaCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=15 a=1 
--------------AUGCGGACGAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=12 a=1 
----------------GCGGACGAAACCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ l=13 a=1 
-----------------------------------------------------------------------------------------------UAAUGUUUGACCAUCUUUAUUCUUCCACAAACGUAUUG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=38 a=1 
-------------------------------------------------------------------------------------------------------------------UCUUCCACAAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=12 a=1 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAUCUUUAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=14 a=46 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAUCUUUACU--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=15 a=459 
-----------------------------------------------------------------------------------------------------------------------------------UaAGAGAUCUUUACU--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=15 a=1 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGcUCUUUACU--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=15 a=1 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAUCUUUACUU-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=16 a=70 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAUCUUUACUUG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=17 a=631 (ma)
-----------------------------------------------------------------------------------------------------------------------------------UGAGAuAUCUUUACUUG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=17 a=4 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAUCUUUACaUG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=17 a=2 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAcCUUUACUUG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=17 a=1 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAUCUUUACUUGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ l=18 a=15 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAUCUUUACUUGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=19 a=325 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGcUCUUUACUUGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=19 a=1 
-----------------------------------------------------------------------------------------------------------------------------------UaAGAGAUCUUUACUUGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=19 a=1 
-----------------------------------------------------------------------------------------------------------------------------------UcAGAGAUCUUUACUUGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=19 a=1 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAUCUUUACUUGCAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=20 a=516 (c)
-----------------------------------------------------------------------------------------------------------------------------------UaAGAGAUCUUUACUUGCAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=20 a=1 
-----------------------------------------------------------------------------------------------------------------------------------UcAGAGAUCUUUACUUGCAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=20 a=1 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAUCUUUACaUGCAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=20 a=1 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAUCUUUACUUGCgG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=20 a=2 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAUCUUaACUUGCAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=20 a=1 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAUCUUUgCUUGCAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=20 a=1 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAUCUUUACcUGCAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=20 a=1 
-----------------------------------------------------------------------------------------------------------------------------------UuAGAGAUCUUUACUUGCAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=20 a=1 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAUCUUUAaUUGCAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=20 a=1 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGcUCUUUACUUGCAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=20 a=1 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAUCUUUACUUGCAGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=21 a=64 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAaCUUUACUUGCAGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=21 a=1 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAUCUUUACUUGCAGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=22 a=63 
-----------------------------------------------------------------------------------------------------------------------------------UaAGAGAUCUUUACUUGCAGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=22 a=1 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAUCUUUACUUGCAGAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=23 a=233 
-----------------------------------------------------------------------------------------------------------------------------------UGAuAGAUCUUUACUUGCAGAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=23 a=1 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAUCUUUACUUuCAGAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=23 a=1 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAUuUUUACUUGCAGAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=23 a=1 
-----------------------------------------------------------------------------------------------------------------------------------UaAGAGAUCUUUACUUGCAGAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=23 a=1 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAUCUUUACUUGCAGAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ l=24 a=335 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAUCUUaACUUGCAGAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ l=24 a=1 
-----------------------------------------------------------------------------------------------------------------------------------aGAGAGAUCUUUACUUGCAGAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ l=24 a=1 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAUCUUUACUUGCAGAAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=25 a=108 
-----------------------------------------------------------------------------------------------------------------------------------UaAGAGAUCUUUACUUGCAGAAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=25 a=1 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAUCUUUACUUGCAGAAAAAU---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=26 a=29 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAUCUUUACUUGCAGAAAAAa---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=26 a=1 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAUCUUUACUUGCAGAAAAAUU--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=27 a=34 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAUCUUUACUUGCgGAAAAAUU--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=27 a=1 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAUCUUUACUUGCAGAAAAAUUC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=28 a=36 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAUCUUUACUUGCAGAAAAAUUCU------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=29 a=4 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAUCUUUACUUGCAGAAAAAUUCUUC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=31 a=1 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAUCUUUACUUGCAGAAAAAUUCUUCGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=33 a=1 
-----------------------------------------------------------------------------------------------------------------------------------UGAGAGAUCUUUACUUGCAGAAAAAUUCUUCGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=34 a=2 
------------------------------------------------------------------------------------------------------------------------------------GAGAGAUCUUUACU--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=14 a=2 
------------------------------------------------------------------------------------------------------------------------------------GAGAGAUCUUUACUUG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=16 a=1 
------------------------------------------------------------------------------------------------------------------------------------GAGAGAUCUUUACUUGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=18 a=8 
------------------------------------------------------------------------------------------------------------------------------------GAGAGAUCUUUACUUGCAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=19 a=1 
-------------------------------------------------------------------------------------------------------------------------------------AGAGAUCUUUACUUGCAGAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=21 a=1 
----------------------------------------------------------------------------------------------------------------------------------------GAUCUUUACUUGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=14 a=1 
---------------------------------------------------------------------------------------------------------------------------------------------------------AAAUUCUUCGGCAAGUAAGAGAUCUCUCAAU------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=31 a=1 
----------------------------------------------------------------------------------------------------------------------------------------------------------AAUUCUUCGGCAAGUAAGAGAUCUCUCAAU------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=30 a=1 
-----------------------------------------------------------------------------------------------------------------------------------------------------------AUUCUUCGGCAAGUAAGAGAUCUCUCAAU------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=29 a=3 
------------------------------------------------------------------------------------------------------------------------------------------------------------UUCUUCGGCAAGUAAGAGAUCUCUCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=27 a=2 
------------------------------------------------------------------------------------------------------------------------------------------------------------UUCUUCGGCAAGUAAGAGAUCUCUCAAU------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=28 a=3 
-------------------------------------------------------------------------------------------------------------------------------------------------------------UCUUCGGCAAGUA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=13 a=1 
-------------------------------------------------------------------------------------------------------------------------------------------------------------UCUUCGGCAAGUAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=14 a=1 
-------------------------------------------------------------------------------------------------------------------------------------------------------------UCUUCGGCAAGUAAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=15 a=1 
-------------------------------------------------------------------------------------------------------------------------------------------------------------UCUUCGGCAAGUAAGAGAUCUCUCAAU------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=27 a=6 
-------------------------------------------------------------------------------------------------------------------------------------------------------------UCUUCGGCAAGUAAGAGAUCUCUCAAUA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ l=28 a=1 
--------------------------------------------------------------------------------------------------------------------------------------------------------------CUUCGGCAAGUAAGAGAUCUCUCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=24 a=2 
--------------------------------------------------------------------------------------------------------------------------------------------------------------CUUCGGCAAGUAAGAGAUCUCUCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=25 a=6 
--------------------------------------------------------------------------------------------------------------------------------------------------------------CUUCGGCAAGUAAGAGAUCUCUCAAa------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=26 a=3 
--------------------------------------------------------------------------------------------------------------------------------------------------------------CUUCGGCAAGUAAGAGAUCUCUCAAU------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=26 a=22 
--------------------------------------------------------------------------------------------------------------------------------------------------------------CUUCGGCAAGUAAGAGAUCUCUCAAg------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=26 a=1 
---------------------------------------------------------------------------------------------------------------------------------------------------------------UUCGGCAAGUAAGAGAUC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=18 a=1 
---------------------------------------------------------------------------------------------------------------------------------------------------------------UUCGGCAAGUAAGAGAUCUCUCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=24 a=1 
---------------------------------------------------------------------------------------------------------------------------------------------------------------UUCGGCAAGUAAGAGAUCUCUCAAU------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=25 a=7 
----------------------------------------------------------------------------------------------------------------------------------------------------------------UCGGCAAGUAAGAGAUCUCUC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=21 a=1 
----------------------------------------------------------------------------------------------------------------------------------------------------------------UCGGCAAGUAAGAGAUCUCUCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=23 a=1 
----------------------------------------------------------------------------------------------------------------------------------------------------------------UCGGCAAGUAAGAGAUCUCUCAAU------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=24 a=12 
----------------------------------------------------------------------------------------------------------------------------------------------------------------UCGGCAAGUAAGAGAUCUCUCAAa------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=24 a=2 
----------------------------------------------------------------------------------------------------------------------------------------------------------------UCGGCAAGUAAGAGAUCUCUCAAUA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ l=25 a=1 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------CGGCAAGUAAGAGAUCUCUC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=20 a=1 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------CGGCAAGUAAGAGAUCUCUCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=22 a=4 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------CGGCAAGcAAGAGAUCUCUCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=22 a=1 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------CGGCAAGUAAGAGAUCUCUCAAU------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=23 a=31 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------CGGCAAGUAAGAGAUCUCUCAAa------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=23 a=3 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------CGGCAAGUAAGAGAUCUCUCAAUA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ l=24 a=1 
------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAAGUAAGAGAUCUCUCAAU------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=22 a=1 
-------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAGUAAGAGAUCUC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ l=16 a=1 
-------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAGUAAGAGAUCUCU----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=17 a=2 
-------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAGUAAGAGAUCUCUCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=19 a=4 
-------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAGUAAGAGAUCUCUCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=20 a=3 
-------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAGUAAGAGAUCUCUCAAU------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=21 a=12 (c*)
-------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAGUAAGAGAUCUCUCAAUA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ l=22 a=1 
--------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAGUAAGAGAUCUCU----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=16 a=1 
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAGAUCUCUCAAU------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=14 a=3 
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAGUAAAGAUCUCAGUACGUCUGUGGAAU------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=30 a=1 
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUAAcGAUCUCAGUA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=15 a=1 
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AUCUCAGUACGUCUGUGGAAUCUCGAGACCAUGCAGACUGUCGCCA------------------------------------------------------------------------------------------------------------------------------------------ l=46 a=1 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACaUCUGUGGAAUCU----------------------------------------------------------------------------------------------------------------------------------------------------------------- l=15 a=1 
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACCAUGCAGACUG------------------------------------------------------------------------------------------------------------------------------------------------ l=15 a=1 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACCAUGCAGACUGUCGCCAUC---------------------------------------------------------------------------------------------------------------------------------------- l=22 a=1 
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCAUGCAGACUGUCGCCAUC---------------------------------------------------------------------------------------------------------------------------------------- l=21 a=2 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAUGCAGACUGUCGCCAUC---------------------------------------------------------------------------------------------------------------------------------------- l=20 a=1 
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UGCAGACUGUCGCCAU----------------------------------------------------------------------------------------------------------------------------------------- l=16 a=1 
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UGCAGACUGUCGCCAUCUUU------------------------------------------------------------------------------------------------------------------------------------- l=20 a=1 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGACUGUCGCCAUCUUUAC----------------------------------------------------------------------------------------------------------------------------------- l=21 a=2 
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGACUGUCG--------------------------------------------------------------------------------------------------------------------------------------------- l=10 a=1 
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGACUGUCGCCAUCUUUACCGGAGAAUUGAUUAUAAGGA--------------------------------------------------------------------------------------------------------------- l=40 a=1 
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACUGUCGCCAUC---------------------------------------------------------------------------------------------------------------------------------------- l=12 a=1 
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAAUAUCUUAAgGA--------------------------------------------- l=16 a=1 

mb-01011
ax-1010001
ku-11
ss-101001111100
fn-111
